Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015878257.1_cds_XP_016436738.1_32566
CDS Infomation

[gene=LOC107762853] [db_xref=GeneID:107762853] [protein=shikimate O-hydroxycinnamoyltransferase-like] [protein_id=XP_016436738.1] [location=join(96201..96638,98736..99707)] [gbkey=CDS]
Sequence

ATGTGTATAAAAGAGATAACTACAAAAAGAAACTTCAATCTAAAGATGAGCAACACTGAA
TTGGTGGCAGCAGTTTTGCCAATACAAGAGCATTGGCTACCACTGTCCAATCTTGACTTG
CTATTGCCTCCATTGGATGTTGGAGTTATTTTCTGTTATCAAAATCTCATTTCAGTGACA
ACCAAATTAGAATTTGGTTCAATGGTTAGAATTCTCAAAGCTTCTTTGGCTGAAACATTA
GTTTCTTATTATGCATTTGCTGGAGAGATAGTTCAGAACTTAGCTGGAGAACCTGAGGTT
CTTTGCAACAATAGTGGAGTCAATTTTACAGAAGCTTTTGCTGATGTTGAGCTCAAAGAG
ATTAATTTTTATAATCCAGATGAGAGTATAGAGGGAAATCTTGTTCCAAAGAAGAAGCAT
GGTGTACTAGCTGTTCAGGTTACACAACTCAAATGTGGAGGACTAGTTGTGGGTTGCGCA
TTTGATCATCGAGTTGCTGATGCATATTCAGCCAACTTGTTTCTTGTATCATGGTCTGAA
TTAGCTCAATCCAAACCACTCACTCAGCTCCCATCTTTCCGTAAATCGTTCCTTTTTCCT
CGACATCCTGGTTACTACGATGACTCAATCGATGGCTTGTACGTACCAATACCAACCATA
CCACTCATAAAACCCGAAACCCTAAACCCTAACGATCAAGCAATAAGTAGAATTTACTAT
GTCACGGGGGAGAAAATCAACCACCTTCAATCACTAGCCAATCGTGACCAAAAAAGCACG
AAATTTCAGAGGTCTAAACTTGAATCATTCAGCGCTTTCCTGTGGAAAACAATTGCATGT
GGAATTAAAGAAACGTCGAATTCCAAGAATTTCAGGTTTGGTATCATTGTTGATGGTAGG
ACTAGATTGAGTAACGGAGATGATAATCAAGAAAAATTACTAAAAGGGTATTTTGGCAAT
GTTCTCTCCATCCCATTTGGAAACAAGAAAATTGAGGAGCTAAAAGAGAAGTCGTTGAGT
TGGGTGGCAAATGCAATTCATGAGATTATAGAAAAAGCAGTAACACGCGAACATTTTCTT
GGATTGATAGATTGGGTTGAGGCCCATCGTCCTGAACCGGCCGTGACGAAAATATACGCC
ACGGACGACGATGGGCCCGCCGTGGTAGTATCATCGGGGCAACAATTTCCAGCCAGAGAG
ATAGATTTCGGATGGGGTGAGCCAGTTTTCTGGTCATATCATTTTCCATGGGCAGGAAAA
TCAGGATATGTGATGCCAATGCCAAGTCCTAAAGGAAATGGAGATTGGATTATTTATATG
CATTTGATGAAATGGCAACTGGAACTAATTGAGACTTCTGCTTCCCATGTGTTTAAGCCT
GTGACTGCAAATTATCTCAATTTAATGTGA

Peptide Sequence

PEP ID

XP_016436738.1
PEP Infomation

PREDICTED: shikimate O-hydroxycinnamoyltransferase-like [Nicotiana tabacum]
Sequence

MCIKEITTKRNFNLKMSNTELVAAVLPIQEHWLPLSNLDLLLPPLDVGVIFCYQNLISVT
TKLEFGSMVRILKASLAETLVSYYAFAGEIVQNLAGEPEVLCNNSGVNFTEAFADVELKE
INFYNPDESIEGNLVPKKKHGVLAVQVTQLKCGGLVVGCAFDHRVADAYSANLFLVSWSE
LAQSKPLTQLPSFRKSFLFPRHPGYYDDSIDGLYVPIPTIPLIKPETLNPNDQAISRIYY
VTGEKINHLQSLANRDQKSTKFQRSKLESFSAFLWKTIACGIKETSNSKNFRFGIIVDGR
TRLSNGDDNQEKLLKGYFGNVLSIPFGNKKIEELKEKSLSWVANAIHEIIEKAVTREHFL
GLIDWVEAHRPEPAVTKIYATDDDGPAVVVSSGQQFPAREIDFGWGEPVFWSYHFPWAGK
SGYVMPMPSPKGNGDWIIYMHLMKWQLELIETSASHVFKPVTANYLNLM

Transcript Sequence

Gene sequence data has not been registered.